Could be an issue with the clutch release cam shaft. Not that familiar with how the system all works. With that few of miles on it, I would think the clutch assembly would be in good shape. Make sure that before she shifts, the rpms are up near the top of the gear she is in and it should make the transition to the next gear easier.
I am sure someone else will come along that is more familiar what else to look for. Also, make sure the clutch cable is adjusted correctly so that when you pull the clutch lever, it is fully disengaging the pressure plate.
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